The Kenya Revenue Authority (KRA), in partnership with the Kenya Ports Authority (KPA) and key port stakeholders have put in place plans to reform and decongest the Port of Mombasa, reducing cargo dwell times, and accelerating clearance through a technology-driven, results-oriented approach.
The measures, according to KRA Commissioner-General Humphrey Wattanga, are toward a more predictable, efficient, and digitally enabled port ecosystem that supports both trade facilitation and economic growth.
“The Port of Mombasa is not only a national asset but also a critical regional gateway.Our objective is to eliminate bottlenecks, reduce cargo dwell time, and build a clearance system that is efficient, predictable, and digitally enabled,” Said Wattanga.
KPA Managing Director Capt. William Ruto said reforming the Port was a shared responsibilities and that “KPA will dedicate the necessary infrastructure and resources to ensure successful implementation,” Said Capt. Ruto.
As an immediate intervention, all long-stay consignments earmarked for auction or destruction will be transferred to designated Container Freight Stations, starting with cargo that has remained at the port for more than 21 days.
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The evacuation will begin at the G-section of the port, freeing up critical yard space and easing congestion.
In addition, KRA will expand the Pre-Arrival Processing framework, prioritizing bulk cargo, low-risk shipments, and Authorized Economic Operator consignments. This enhanced system allows cargo to be processed before arrival, significantly reducing clearance times and improving predictability.
KRA will introduce a multi-vendor model via an open expression of interest process to address persistent shortages of Regional Electronic Cargo Tracking System (RECTS) seals.
This move is expected to strengthen system resilience, ensure uninterrupted cargo tracking, and eliminate delays caused by seal shortages.
The authorities also plan to increase the utilisation of Lamu Port for transhipment cargo to relieve pressure on Kilindini and fully leverage Kenya’s northern maritime gateway.
Empty container management, a long-standing bottleneck, will be addressed through a dedicated stacking and loading site within the port. A new industry framework for empty container handling will take effect from 26th January 2026, improving coordination and turnaround times.
The reforms will be underpinned by deeper digital integration to eliminate redundant documentation, reduce manual processes, and enhance operational efficiency. Additional personnel will be deployed at RECTS offices and port gates to expedite cargo arming and exit procedures, delivering immediate improvements in output and service quality.
By Kelvin Kibet
